Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm4294-201ENSMUST00000105169 614 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm12791-201ENSMUST00000120788 655 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Mir1905-201ENSMUST00000122779 82 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm29155-201ENSMUST00000185910 269 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm9102-201ENSMUST00000219250 465 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm18776-201ENSMUST00000188833 654 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm43380-201ENSMUST00000200421 220 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd3B1AR17 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm18968-201ENSMUST00000221319 862 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm10263-201ENSMUST00000085163 300 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd3B1AR17 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.16□□□□□ -0.62
Chd3B1AR17 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd3B1AR17 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.15□□□□□ -0.62
Chd3B1AR17 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm16219-201ENSMUST00000120096 274 ntBASIC11.15□□□□□ -0.62
Chd3B1AR17 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.15□□□□□ -0.62
Chd3B1AR17 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd3B1AR17 Gm35960-201ENSMUST00000202712 767 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms