Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tubb1A2AQ07 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm24891-201ENSMUST00000104391 136 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm12247-201ENSMUST00000117585 670 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm15566-201ENSMUST00000121130 590 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm15549-201ENSMUST00000121595 622 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm12407-201ENSMUST00000180219 324 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm45856-201ENSMUST00000212752 416 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubb1A2AQ07 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb1A2AQ07 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb1A2AQ07 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb1A2AQ07 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb1A2AQ07 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubb1A2AQ07 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gm14277-201ENSMUST00000121195 360 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gm5996-201ENSMUST00000211110 718 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb1A2AQ07 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.63□□□□□ -0.55
Tubb1A2AQ07 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.63□□□□□ -0.55
Tubb1A2AQ07 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Tubb1A2AQ07 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms