Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Gm8342-201ENSMUST00000209839 757 ntBASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cfap99A0A140LIX9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cfap99A0A140LIX9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm25766-201ENSMUST00000104101 131 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm12419-201ENSMUST00000116649 636 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm15744-201ENSMUST00000161734 213 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm29410-201ENSMUST00000188383 694 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm45113-201ENSMUST00000207518 165 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm9139-201ENSMUST00000218817 700 ntBASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cfap99A0A140LIX9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm23272-201ENSMUST00000104053 129 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm9089-201ENSMUST00000122027 526 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm26134-201ENSMUST00000178484 110 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm44315-201ENSMUST00000203041 219 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm3619-201ENSMUST00000219947 775 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Olfr584-201ENSMUST00000098210 964 ntBASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.63□□□□□ -0.23
Cfap99A0A140LIX9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cfap99A0A140LIX9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 263 ms