Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm4310-201ENSMUST00000177847 889 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm14723-201ENSMUST00000118686 215 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm25668-201ENSMUST00000157700 129 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm3329-201ENSMUST00000159873 556 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm28686-201ENSMUST00000187404 609 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H2afb3S4R1G7 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.28□□□□□ -0.76
H2afb3S4R1G7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms