Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm13689-201ENSMUST00000119360 685 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm15487-201ENSMUST00000122373 465 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm22121-201ENSMUST00000175148 54 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm38241-201ENSMUST00000192641 898 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm7775-201ENSMUST00000218871 853 ntBASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Smco4Q9JIS3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.05□□□□□ -0.96
Smco4Q9JIS3 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms