Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Gm12218-201ENSMUST00000117666 399 ntBASIC14.99□□□□□ -0.01
U2af1Q9D883 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Gm24992-201ENSMUST00000157412 130 ntBASIC14.99□□□□□ -0.01
U2af1Q9D883 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.99□□□□□ -0.01
U2af1Q9D883 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.99□□□□□ -0.01
U2af1Q9D883 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.99□□□□□ -0.01
U2af1Q9D883 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
U2af1Q9D883 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
U2af1Q9D883 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm25766-201ENSMUST00000104101 131 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm13182-201ENSMUST00000122241 312 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Mir1956-201ENSMUST00000157748 65 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm24398-201ENSMUST00000157870 109 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Mir7032-201ENSMUST00000185154 79 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.98□□□□□ -0.01
U2af1Q9D883 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm10263-201ENSMUST00000085163 300 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Rgr-203ENSMUST00000225070 4704 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
U2af1Q9D883 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.98□□□□□ -0.01
U2af1Q9D883 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.98□□□□□ -0.01
U2af1Q9D883 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.97□□□□□ -0.01
U2af1Q9D883 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm13937-201ENSMUST00000121000 988 ntBASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.97□□□□□ -0.01
U2af1Q9D883 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm34023-201ENSMUST00000195539 217 ntBASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm43163-201ENSMUST00000196571 442 ntBASIC14.97□□□□□ -0.01
U2af1Q9D883 Gm44158-201ENSMUST00000203881 505 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms