Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm12813-201ENSMUST00000119615 902 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm9230-201ENSMUST00000188228 532 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm6013-201ENSMUST00000212264 699 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trim13Q9CYB0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm13366-201ENSMUST00000122198 970 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms