Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim11Q99PQ2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13□□□□□ -0.33
Trim11Q99PQ2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Gm38116-201ENSMUST00000193873 1533 ntBASIC13□□□□□ -0.33
Trim11Q99PQ2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Gm15808-201ENSMUST00000119046 604 ntBASIC13□□□□□ -0.33
Trim11Q99PQ2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13□□□□□ -0.33
Trim11Q99PQ2 CT030182.1-201ENSMUST00000225935 533 ntBASIC13□□□□□ -0.33
Trim11Q99PQ2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim11Q99PQ2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim11Q99PQ2 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm13035-201ENSMUST00000117496 342 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm14277-201ENSMUST00000121195 360 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm3150-201ENSMUST00000166418 204 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm5733-201ENSMUST00000190232 939 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm4857-201ENSMUST00000192718 785 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Gm6722-201ENSMUST00000221586 390 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms