Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh23Q99PF4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Mir704-201ENSMUST00000102106 77 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm15720-201ENSMUST00000117133 282 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm6276-201ENSMUST00000120159 579 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm15258-201ENSMUST00000153801 741 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm45225-201ENSMUST00000206852 1139 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm44658-201ENSMUST00000207965 637 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm45308-201ENSMUST00000210610 415 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm10689-201ENSMUST00000098864 432 ntBASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh23Q99PF4 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm6881-201ENSMUST00000121811 833 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm8707-201ENSMUST00000183325 980 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 AC122459.4-201ENSMUST00000228654 551 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm12240-201ENSMUST00000120178 229 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm27833-201ENSMUST00000184285 124 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm29548-201ENSMUST00000187012 694 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm28105-201ENSMUST00000187788 694 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Gm7565-201ENSMUST00000203611 623 ntBASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdh23Q99PF4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms