Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm37284-201ENSMUST00000193607 539 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sf3b1Q99NB9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm6407-201ENSMUST00000176468 549 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm23694-201ENSMUST00000179335 110 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm3726-201ENSMUST00000203110 785 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sf3b1Q99NB9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Gm14807-201ENSMUST00000116640 983 ntBASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Mir7051-201ENSMUST00000184167 73 ntBASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Gm6722-201ENSMUST00000221586 390 ntBASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3b1Q99NB9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms