Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gm15881-201ENSMUST00000148792 942 ntBASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.28□□□□□ -0.44
Tlr3Q99MB1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tlr3Q99MB1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tlr3Q99MB1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm22920-201ENSMUST00000102175 109 ntBASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm16397-201ENSMUST00000122201 494 ntBASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm10774-201ENSMUST00000188689 204 ntBASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm8365-201ENSMUST00000197334 648 ntBASIC12.27□□□□□ -0.45
Tlr3Q99MB1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm8342-201ENSMUST00000209839 757 ntBASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm6722-201ENSMUST00000221586 390 ntBASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tlr3Q99MB1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm22711-201ENSMUST00000116890 133 ntBASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tlr3Q99MB1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms