Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Mir671-201ENSMUST00000102432 98 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm14807-201ENSMUST00000116640 983 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm7150-201ENSMUST00000122032 981 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm38117-201ENSMUST00000194653 939 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm43852-201ENSMUST00000202098 917 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.06□□□□□ -0.8
Scrt1Q99M85 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Scrt1Q99M85 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm11619-201ENSMUST00000117474 237 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm37981-201ENSMUST00000194280 535 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm5870-201ENSMUST00000196461 282 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm8574-201ENSMUST00000203207 924 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.05□□□□□ -0.8
Scrt1Q99M85 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Scrt1Q99M85 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms