Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm18010-201ENSMUST00000203553 202 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm9204-201ENSMUST00000212641 947 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm7589-201ENSMUST00000085631 534 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm24089-201ENSMUST00000093696 109 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.08□□□□□ -0.15
RtcbQ99LF4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RtcbQ99LF4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm23595-201ENSMUST00000104306 130 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm11952-201ENSMUST00000121172 821 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm6612-201ENSMUST00000170777 395 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Mir6973a-201ENSMUST00000183646 78 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm19918-201ENSMUST00000194858 400 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Gm8234-201ENSMUST00000198523 1107 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.08□□□□□ -0.16
RtcbQ99LF4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RtcbQ99LF4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm15617-201ENSMUST00000118973 771 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm4917-201ENSMUST00000121452 650 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm16165-201ENSMUST00000160140 795 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 AC154407.1-201ENSMUST00000226777 526 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm10580-201ENSMUST00000097985 396 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm10582-201ENSMUST00000097987 396 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm10583-201ENSMUST00000097988 396 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RtcbQ99LF4 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.07□□□□□ -0.16
RtcbQ99LF4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms