Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm8459-201ENSMUST00000162504 760 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm29615-201ENSMUST00000185371 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28224-201ENSMUST00000186078 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm29001-201ENSMUST00000186177 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28292-201ENSMUST00000186593 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28101-201ENSMUST00000187608 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm29076-201ENSMUST00000187689 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28302-201ENSMUST00000187931 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28646-201ENSMUST00000188220 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28205-201ENSMUST00000189177 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm29032-201ENSMUST00000189797 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm28695-201ENSMUST00000190300 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm37448-201ENSMUST00000192795 697 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm38151-201ENSMUST00000195085 289 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm9353-201ENSMUST00000200472 604 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.42□□□□□ -0.74
Lims1Q99JW4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Lims1Q99JW4 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm26361-201ENSMUST00000158868 186 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm17376-201ENSMUST00000166016 84 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Mir7070-201ENSMUST00000183657 86 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm18038-201ENSMUST00000197900 485 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.41□□□□□ -0.74
Lims1Q99JW4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Lims1Q99JW4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lims1Q99JW4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lims1Q99JW4 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Lims1Q99JW4 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms