Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm22920-201ENSMUST00000102175 109 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm22902-201ENSMUST00000158488 302 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm3150-201ENSMUST00000166418 204 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdha3Q91Y16 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm14071-201ENSMUST00000117817 509 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm22144-201ENSMUST00000157402 102 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm43852-201ENSMUST00000202098 917 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gm43947-201ENSMUST00000203019 959 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdha3Q91Y16 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Erich3-203ENSMUST00000189969 3460 ntBASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdha3Q91Y16 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdha3Q91Y16 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms