Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhb18Q91Y02 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm11801-201ENSMUST00000117807 746 ntBASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm18059-201ENSMUST00000208073 580 ntBASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb18Q91Y02 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm14270-201ENSMUST00000118388 846 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm13422-201ENSMUST00000118834 504 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm12274-201ENSMUST00000120062 385 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm3726-201ENSMUST00000203110 785 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Gm25201-201ENSMUST00000083093 170 ntBASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb18Q91Y02 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms