Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gm22144-201ENSMUST00000157402 102 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Mir5120-201ENSMUST00000175020 78 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Mir7686-201ENSMUST00000200604 57 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm11836-201ENSMUST00000121022 441 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm9089-201ENSMUST00000122027 526 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm21778-201ENSMUST00000178779 471 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm9555-201ENSMUST00000200908 583 ntBASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdhb6Q91XZ4 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdhb6Q91XZ4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdhb6Q91XZ4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms