Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim60Q8VI40 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim60Q8VI40 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim60Q8VI40 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim60Q8VI40 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim60Q8VI40 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim60Q8VI40 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm13996-201ENSMUST00000118456 430 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm7150-201ENSMUST00000122032 981 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm3332-201ENSMUST00000189337 928 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm4857-201ENSMUST00000192718 785 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm5714-201ENSMUST00000197343 566 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm43822-201ENSMUST00000200285 476 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm8913-201ENSMUST00000209491 641 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.8□□□□□ -0.52
Trim60Q8VI40 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim60Q8VI40 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm23596-201ENSMUST00000104304 132 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm27320-201ENSMUST00000184892 109 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm38151-201ENSMUST00000195085 289 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm6108-201ENSMUST00000208365 367 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm45433-201ENSMUST00000209386 247 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.79□□□□□ -0.52
Trim60Q8VI40 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim60Q8VI40 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms