Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Vopp1Q8R1C3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vopp1Q8R1C3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.95□□□□□ -0.5
Vopp1Q8R1C3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.95□□□□□ -0.5
Vopp1Q8R1C3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vopp1Q8R1C3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vopp1Q8R1C3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Gm11996-201ENSMUST00000117538 915 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Gm18733-202ENSMUST00000174447 401 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Gm5870-201ENSMUST00000196461 282 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Gm8170-201ENSMUST00000218581 945 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Gm5449-201ENSMUST00000081132 357 ntBASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vopp1Q8R1C3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Gm12463-201ENSMUST00000118271 849 ntBASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Gm18801-201ENSMUST00000186616 536 ntBASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vopp1Q8R1C3 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vopp1Q8R1C3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms