Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ebf4Q8K4J2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm25261-201ENSMUST00000157416 134 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm27839-201ENSMUST00000184242 106 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ebf4Q8K4J2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Gm15806-201ENSMUST00000120696 955 ntBASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Ebf4Q8K4J2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms