Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cchcr1Q8K2I2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm24891-201ENSMUST00000104391 136 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm22846-201ENSMUST00000157706 270 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm27530-201ENSMUST00000184096 98 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm4857-201ENSMUST00000192718 785 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm4482-201ENSMUST00000200876 742 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cchcr1Q8K2I2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm37580-201ENSMUST00000192408 2800 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm29499-201ENSMUST00000189151 486 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm28329-201ENSMUST00000191208 689 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm29171-201ENSMUST00000191397 486 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm45856-201ENSMUST00000212752 416 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cchcr1Q8K2I2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms