Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm25881-201ENSMUST00000157783 103 ntBASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm8459-201ENSMUST00000162504 760 ntBASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm8100-201ENSMUST00000182906 988 ntBASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm45186-201ENSMUST00000206874 478 ntBASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm8385-201ENSMUST00000058999 643 ntBASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm42571-201ENSMUST00000201197 2464 ntBASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm18734-201ENSMUST00000172937 808 ntBASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Rgr-203ENSMUST00000225070 4704 ntBASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc38Q8CDN8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Gm14208-201ENSMUST00000119645 678 ntBASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc38Q8CDN8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms