Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.27□□□□□ -0.28
Alx1Q8C8B0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Alx1Q8C8B0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm13284-201ENSMUST00000121020 547 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Mir1901-201ENSMUST00000122616 78 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm24398-201ENSMUST00000157870 109 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm8531-201ENSMUST00000188319 893 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm18561-201ENSMUST00000206027 804 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm39288-201ENSMUST00000210554 446 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Alx1Q8C8B0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm9133-201ENSMUST00000118289 540 ntBASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm12208-201ENSMUST00000122004 163 ntBASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Mir1956-201ENSMUST00000157748 65 ntBASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.26□□□□□ -0.29
Alx1Q8C8B0 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Alx1Q8C8B0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms