Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm7666-201ENSMUST00000146631 819 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm7741-201ENSMUST00000181445 989 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm8574-201ENSMUST00000203207 924 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm4294-201ENSMUST00000105169 614 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm12165-201ENSMUST00000117047 342 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm11244-201ENSMUST00000121243 237 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trub1Q8C0D0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trub1Q8C0D0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms