Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm5159-201ENSMUST00000212733 1652 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Gm7964-201ENSMUST00000051522 1378 ntBASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col16a1Q8BLX7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm12028-201ENSMUST00000118065 436 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm9574-201ENSMUST00000173127 845 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Zcwpw2-203ENSMUST00000187803 372 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm43667-201ENSMUST00000198616 1095 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm8170-201ENSMUST00000218581 945 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Gm4775-201ENSMUST00000169588 402 ntBASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col16a1Q8BLX7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm24140-201ENSMUST00000122773 326 ntBASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm6291-201ENSMUST00000179994 309 ntBASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm17944-201ENSMUST00000186351 643 ntBASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm37688-201ENSMUST00000195195 465 ntBASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col16a1Q8BLX7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Gm12009-201ENSMUST00000121361 1100 ntBASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Gm11736-201ENSMUST00000121468 505 ntBASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Gm4943-201ENSMUST00000132879 424 ntBASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Gm28671-201ENSMUST00000187036 692 ntBASIC14.71□□□□□ -0.05
Col16a1Q8BLX7 Gm43811-201ENSMUST00000202862 695 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms