Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm14571-201ENSMUST00000118292 570 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm8754-201ENSMUST00000118391 520 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm12240-201ENSMUST00000120178 229 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm11960-201ENSMUST00000122068 925 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Mir6396-201ENSMUST00000183603 111 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 AC140314.1-201ENSMUST00000219549 554 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm6939-201ENSMUST00000122029 864 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm9771-201ENSMUST00000198267 1137 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm11191-201ENSMUST00000117231 610 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm25804-201ENSMUST00000122785 188 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm13377-201ENSMUST00000137984 683 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm9409-201ENSMUST00000197017 316 ntBASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smg1Q8BKX6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm12463-201ENSMUST00000118271 849 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm5526-201ENSMUST00000153604 423 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm28746-201ENSMUST00000187453 380 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm16219-201ENSMUST00000120096 274 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm8163-201ENSMUST00000122020 1060 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 AC102327.1-201ENSMUST00000226389 742 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 AC107711.3-201ENSMUST00000228939 1035 ntBASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smg1Q8BKX6 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms