Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm18065-201ENSMUST00000221395 526 ntBASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim6Q8BGE7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Gm43962-201ENSMUST00000203898 190 ntBASIC12.12□□□□□ -0.47
Trim6Q8BGE7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim6Q8BGE7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm14109-201ENSMUST00000118814 309 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm14726-201ENSMUST00000120623 896 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm8062-201ENSMUST00000139696 444 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Rps4l-202ENSMUST00000204242 789 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms