Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm23272-201ENSMUST00000104053 129 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm12247-201ENSMUST00000117585 670 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm22442-201ENSMUST00000157256 144 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm8492-201ENSMUST00000182375 987 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm29155-201ENSMUST00000185910 269 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh8Q7TSK3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Gm11628-201ENSMUST00000117568 171 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Gm12899-201ENSMUST00000120565 551 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Mir1901-201ENSMUST00000122616 78 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Mir1956-201ENSMUST00000157748 65 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Gm37458-201ENSMUST00000194055 410 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Gm7504-201ENSMUST00000201449 424 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh8Q7TSK3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Gm28388-201ENSMUST00000186262 437 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.28□□□□□ -0.6
Pcdh8Q7TSK3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms