Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Gm26391-201ENSMUST00000179843 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Gm42751-201ENSMUST00000198065 559 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Gm24089-201ENSMUST00000093696 109 ntBASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ddx55Q6ZPL9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm13094-201ENSMUST00000117930 409 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm6630-201ENSMUST00000119199 454 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm11952-201ENSMUST00000121172 821 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm4917-201ENSMUST00000121452 650 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm16165-201ENSMUST00000160140 795 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm26119-201ENSMUST00000175601 104 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm6331-201ENSMUST00000217890 450 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ddx55Q6ZPL9 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.97□□□□□ -0.33
Ddx55Q6ZPL9 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms