Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scaf4Q6PFF0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm7150-201ENSMUST00000122032 981 ntBASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Scaf4Q6PFF0 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm22133-201ENSMUST00000102082 109 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm8343-201ENSMUST00000182705 994 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm4157-201ENSMUST00000211647 679 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms