Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rad54bQ6PFE3 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm2965-201ENSMUST00000198365 343 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm6722-201ENSMUST00000221586 390 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rad54bQ6PFE3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm15711-201ENSMUST00000118889 535 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm15617-201ENSMUST00000118973 771 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm24749-201ENSMUST00000157838 343 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm27530-201ENSMUST00000184096 98 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm9899-201ENSMUST00000065519 555 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms