Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Smarcd3Q6P9Z1 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm5616-201ENSMUST00000165252 384 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm8741-201ENSMUST00000174736 384 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm25700-201ENSMUST00000177693 110 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm27627-201ENSMUST00000183644 150 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm38317-201ENSMUST00000195564 343 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.45□□□□□ -0.74
Smarcd3Q6P9Z1 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm24255-201ENSMUST00000104481 128 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm14071-201ENSMUST00000117817 509 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm13665-201ENSMUST00000120830 528 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm20482-202ENSMUST00000174729 825 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 AY036118-201ENSMUST00000200021 923 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Gm17812-201ENSMUST00000204935 318 ntBASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms