Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm44262-201ENSMUST00000204969 372 ntBASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm15236-201ENSMUST00000117309 379 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm11783-201ENSMUST00000119549 885 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm7150-201ENSMUST00000122032 981 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm27627-201ENSMUST00000183644 150 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm37666-201ENSMUST00000194110 866 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm8913-201ENSMUST00000209491 641 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.6□□□□□ -0.39
Krt39Q6IFX4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt39Q6IFX4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm13996-201ENSMUST00000118456 430 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm14017-201ENSMUST00000121934 386 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm18212-201ENSMUST00000211678 889 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms