Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gli3Q61602 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gli3Q61602 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gli3Q61602 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15□□□□□ -0.01
Gli3Q61602 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Gli3Q61602 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Gli3Q61602 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 A1cf-204ENSMUST00000224564 1432 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Gli3Q61602 Gm12950-201ENSMUST00000121683 417 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC14.99□□□□□ -0.01
Gli3Q61602 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Gm24180-201ENSMUST00000179961 110 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Gm33366-201ENSMUST00000195583 3827 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Gli3Q61602 AC122356.2-201ENSMUST00000226962 820 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Gli3Q61602 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Gm44664-201ENSMUST00000206841 1786 ntBASIC14.99□□□□□ -0.01
Gli3Q61602 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.99□□□□□ -0.01
Gli3Q61602 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Gli3Q61602 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Gli3Q61602 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Gli3Q61602 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.99□□□□□ -0.01
Gli3Q61602 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm16301-201ENSMUST00000161959 295 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm3052-201ENSMUST00000186409 829 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC14.98□□□□□ -0.01
Gli3Q61602 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Gli3Q61602 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Gli3Q61602 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm38034-201ENSMUST00000193915 2069 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Gm11686-201ENSMUST00000122397 333 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC14.98□□□□□ -0.01
Gli3Q61602 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm19798-201ENSMUST00000201502 457 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Gm3198-201ENSMUST00000208725 1026 ntBASIC14.98□□□□□ -0.01
Gli3Q61602 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC14.98□□□□□ -0.01
Gli3Q61602 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Gli3Q61602 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Gli3Q61602 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Gli3Q61602 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Gli3Q61602 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gli3Q61602 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gli3Q61602 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gli3Q61602 Gm8806-201ENSMUST00000120076 1407 ntBASIC14.97□□□□□ -0.01
Gli3Q61602 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gli3Q61602 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Gli3Q61602 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.97□□□□□ -0.01
Gli3Q61602 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gli3Q61602 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC14.97□□□□□ -0.01
Gli3Q61602 Gm12420-201ENSMUST00000119869 1048 ntBASIC14.97□□□□□ -0.01
Gli3Q61602 Gm13543-201ENSMUST00000121230 796 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms