Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Foxd4Q60688 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Foxd4Q60688 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Foxd4Q60688 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxd4Q60688 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxd4Q60688 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.31□□□□□ -0.44
Foxd4Q60688 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.31□□□□□ -0.44
Foxd4Q60688 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Foxd4Q60688 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Foxd4Q60688 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxd4Q60688 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm15370-201ENSMUST00000117158 253 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm6023-201ENSMUST00000118217 606 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm11446-201ENSMUST00000121319 866 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm42438-201ENSMUST00000197832 974 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.3□□□□□ -0.44
Foxd4Q60688 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC12.3□□□□□ -0.44
Foxd4Q60688 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 AC123738.1-201ENSMUST00000224796 773 ntBASIC12.3□□□□□ -0.44
Foxd4Q60688 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Foxd4Q60688 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxd4Q60688 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Foxd4Q60688 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm22543-201ENSMUST00000104347 94 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm12383-201ENSMUST00000120628 760 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm13316-201ENSMUST00000140537 691 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm2991-201ENSMUST00000173338 480 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm26461-201ENSMUST00000175064 290 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms