Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.99□□□□□ -0.65
ClpbQ60649 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.99□□□□□ -0.65
ClpbQ60649 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.98□□□□□ -0.65
ClpbQ60649 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ClpbQ60649 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
ClpbQ60649 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
ClpbQ60649 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
ClpbQ60649 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
ClpbQ60649 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ClpbQ60649 Gm3508-201ENSMUST00000186012 792 ntBASIC10.98□□□□□ -0.65
ClpbQ60649 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
ClpbQ60649 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.98□□□□□ -0.65
ClpbQ60649 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.98□□□□□ -0.65
ClpbQ60649 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ClpbQ60649 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.98□□□□□ -0.65
ClpbQ60649 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ClpbQ60649 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
ClpbQ60649 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ClpbQ60649 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 Gm5523-201ENSMUST00000180415 997 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 Mir7686-201ENSMUST00000200604 57 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 Gm45118-201ENSMUST00000208928 825 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
ClpbQ60649 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.97□□□□□ -0.65
ClpbQ60649 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ClpbQ60649 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
ClpbQ60649 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ClpbQ60649 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
ClpbQ60649 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
ClpbQ60649 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
ClpbQ60649 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms