Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm16166-201ENSMUST00000118291 787 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm15615-201ENSMUST00000118876 198 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm15329-201ENSMUST00000121408 155 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm15549-201ENSMUST00000121595 622 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm22334-201ENSMUST00000158070 133 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm3329-201ENSMUST00000159873 556 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm44008-201ENSMUST00000204345 412 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm45770-201ENSMUST00000212105 616 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.93□□□□□ -0.66
Xrcc1Q60596 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Xrcc1Q60596 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Erich3-203ENSMUST00000189969 3460 ntBASIC10.92□□□□□ -0.66
Xrcc1Q60596 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.92□□□□□ -0.66
Xrcc1Q60596 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gm43966-201ENSMUST00000203301 612 ntBASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.92□□□□□ -0.66
Xrcc1Q60596 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.92□□□□□ -0.66
Xrcc1Q60596 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms