Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm43817-201ENSMUST00000196459 2262 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm19178-201ENSMUST00000217524 1819 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm12203-201ENSMUST00000118235 598 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm12209-201ENSMUST00000120089 596 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm16296-201ENSMUST00000159905 325 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm4271-201ENSMUST00000174444 973 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 AC162801.1-201ENSMUST00000220612 198 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm24136-201ENSMUST00000083374 165 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm14608-201ENSMUST00000120030 1553 ntBASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trav3-3Q5R1C3 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm44152-201ENSMUST00000205007 1691 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm24231-201ENSMUST00000104315 133 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms