Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm44506-201ENSMUST00000206278 965 ntBASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm45856-201ENSMUST00000212752 416 ntBASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm14193-201ENSMUST00000105067 153 ntBASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm24844-201ENSMUST00000158679 127 ntBASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm1821-202ENSMUST00000227415 750 ntBASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rnf20Q5DTM8 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rnf20Q5DTM8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm23251-201ENSMUST00000103773 110 ntBASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm4909-201ENSMUST00000118749 794 ntBASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm37246-201ENSMUST00000192665 835 ntBASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rnf20Q5DTM8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms