Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rc3h1Q4VGL6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rc3h1Q4VGL6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rc3h1Q4VGL6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rc3h1Q4VGL6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm15074-201ENSMUST00000117603 936 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm14892-201ENSMUST00000117636 267 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm13117-201ENSMUST00000120894 691 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm15782-201ENSMUST00000121073 445 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm25554-201ENSMUST00000158075 113 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm37284-201ENSMUST00000193607 539 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rc3h1Q4VGL6 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm25063-201ENSMUST00000104666 94 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm12030-201ENSMUST00000121917 223 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm26134-201ENSMUST00000178484 110 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm28877-201ENSMUST00000191349 604 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm37293-201ENSMUST00000191658 295 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm42816-201ENSMUST00000198433 325 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Gm3619-201ENSMUST00000219947 775 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rc3h1Q4VGL6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms