Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Trim43aQ3TL54 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm38117-201ENSMUST00000194653 939 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gzmn-202ENSMUST00000225535 989 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43aQ3TL54 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.11□□□□□ -0.47
Trim43aQ3TL54 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm14017-201ENSMUST00000121934 386 ntBASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms