Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cul4aQ3TCH7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cul4aQ3TCH7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cul4aQ3TCH7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm15374-201ENSMUST00000119313 844 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm17376-201ENSMUST00000166016 84 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm18734-201ENSMUST00000172937 808 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm4857-201ENSMUST00000192718 785 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm2965-201ENSMUST00000198365 343 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm42867-201ENSMUST00000202995 469 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Gm6108-201ENSMUST00000208365 367 ntBASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cul4aQ3TCH7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm15617-201ENSMUST00000118973 771 ntBASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm12196-201ENSMUST00000120954 262 ntBASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Olfml3-204ENSMUST00000169286 874 ntBASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Gm45856-201ENSMUST00000212752 416 ntBASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cul4aQ3TCH7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cul4aQ3TCH7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gm25148-201ENSMUST00000104611 123 ntBASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gm15198-201ENSMUST00000117283 177 ntBASIC11.95□□□□□ -0.5
Cul4aQ3TCH7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms