Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.18□□□□□ -0.46
Col19a1Q0VF58 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm11380-201ENSMUST00000118067 560 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm15636-201ENSMUST00000119205 668 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm6441-201ENSMUST00000120983 696 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm11952-201ENSMUST00000121172 821 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm18041-201ENSMUST00000218210 618 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Thoc7-209ENSMUST00000225325 765 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Nsmce2-203ENSMUST00000227173 1122 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col19a1Q0VF58 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Mir8091-201ENSMUST00000183602 139 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm19927-201ENSMUST00000185792 781 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm38103-201ENSMUST00000191707 864 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm8643-201ENSMUST00000195228 625 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm45893-201ENSMUST00000211899 247 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col19a1Q0VF58 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms