Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm14942-201ENSMUST00000119642 336 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm5982-201ENSMUST00000196234 512 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm45219-201ENSMUST00000205602 465 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm10752-201ENSMUST00000218348 729 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.85□□□□□ -0.67
Nkx3-2P97503 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx3-2P97503 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gm7150-201ENSMUST00000122032 981 ntBASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx3-2P97503 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.84□□□□□ -0.67
Nkx3-2P97503 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx3-2P97503 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms