Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lig3P97386 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lig3P97386 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Gm11509-201ENSMUST00000117358 325 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm11980-201ENSMUST00000121445 986 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm8737-201ENSMUST00000122208 642 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Gm9645-201ENSMUST00000197131 792 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm44329-201ENSMUST00000197469 112 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm43520-201ENSMUST00000197996 164 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Gm9111-201ENSMUST00000219394 709 ntBASIC12.56□□□□□ -0.4
Lig3P97386 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.56□□□□□ -0.4
Lig3P97386 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lig3P97386 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lig3P97386 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lig3P97386 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lig3P97386 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.56□□□□□ -0.4
Lig3P97386 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Gm16071-201ENSMUST00000119589 793 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Gm18304-201ENSMUST00000189162 546 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Gm17826-201ENSMUST00000189720 798 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Gm43778-201ENSMUST00000199438 199 ntBASIC12.55□□□□□ -0.4
Lig3P97386 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
Lig3P97386 Gm9139-201ENSMUST00000218817 700 ntBASIC12.55□□□□□ -0.4
Lig3P97386 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.55□□□□□ -0.4
Lig3P97386 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lig3P97386 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lig3P97386 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms