Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sec61a1P61620 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm23200-201ENSMUST00000104379 132 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm7857-201ENSMUST00000117957 358 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Mir3102-201ENSMUST00000175555 104 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm37666-201ENSMUST00000194110 866 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.08□□□□□ -0.8
Sec61a1P61620 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.08□□□□□ -0.8
Sec61a1P61620 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sec61a1P61620 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.07□□□□□ -0.8
Sec61a1P61620 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms