Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm12857-201ENSMUST00000117678 592 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm11663-201ENSMUST00000117888 290 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm13996-201ENSMUST00000118456 430 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm8815-201ENSMUST00000173809 620 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm44967-201ENSMUST00000207047 631 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm6722-201ENSMUST00000221586 390 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm23596-201ENSMUST00000104304 132 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm27530-201ENSMUST00000184096 98 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm4857-201ENSMUST00000192718 785 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm38341-201ENSMUST00000195357 515 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.9□□□□□ -0.66
Cdkn2bP55271 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cdkn2bP55271 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdkn2bP55271 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdkn2bP55271 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdkn2bP55271 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.9□□□□□ -0.67
Cdkn2bP55271 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdkn2bP55271 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdkn2bP55271 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.9□□□□□ -0.67
Cdkn2bP55271 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdkn2bP55271 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdkn2bP55271 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms