Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.4□□□□□ -0.58
Atxn1P54254 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Atxn1P54254 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Atxn1P54254 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.4□□□□□ -0.59
Atxn1P54254 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.4□□□□□ -0.59
Atxn1P54254 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.4□□□□□ -0.59
Atxn1P54254 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Atxn1P54254 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Atxn1P54254 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.4□□□□□ -0.59
Atxn1P54254 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Atxn1P54254 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Atxn1P54254 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
Atxn1P54254 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm11996-201ENSMUST00000117538 915 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Gm5419-201ENSMUST00000119301 527 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Gm17192-201ENSMUST00000169031 511 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm18776-201ENSMUST00000188833 654 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Gm8574-201ENSMUST00000203207 924 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Gm45085-201ENSMUST00000209100 441 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.39□□□□□ -0.59
Atxn1P54254 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.39□□□□□ -0.59
Atxn1P54254 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Atxn1P54254 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Atxn1P54254 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Gm23912-201ENSMUST00000104687 87 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Gm9089-201ENSMUST00000122027 526 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.38□□□□□ -0.59
Atxn1P54254 Gm38117-201ENSMUST00000194653 939 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Gm37826-201ENSMUST00000195329 322 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Atxn1P54254 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Gm23105-201ENSMUST00000083719 134 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms