Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Fdft1P53798 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Gm11783-201ENSMUST00000119549 885 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Gm14277-201ENSMUST00000121195 360 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Fdft1P53798 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.41□□□□□ -0.58
Fdft1P53798 Gm2383-201ENSMUST00000181461 807 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Gm45575-201ENSMUST00000210283 548 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Fdft1P53798 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.41□□□□□ -0.58
Fdft1P53798 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fdft1P53798 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.4□□□□□ -0.58
Fdft1P53798 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Gm8566-201ENSMUST00000120174 465 ntBASIC11.4□□□□□ -0.58
Fdft1P53798 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.4□□□□□ -0.58
Fdft1P53798 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.4□□□□□ -0.58
Fdft1P53798 Gm45113-201ENSMUST00000207518 165 ntBASIC11.4□□□□□ -0.58
Fdft1P53798 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Fdft1P53798 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.4□□□□□ -0.58
Fdft1P53798 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.4□□□□□ -0.58
Fdft1P53798 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.4□□□□□ -0.58
Fdft1P53798 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Fdft1P53798 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Fdft1P53798 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.4□□□□□ -0.58
Fdft1P53798 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fdft1P53798 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Fdft1P53798 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Fdft1P53798 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Fdft1P53798 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.4□□□□□ -0.59
Fdft1P53798 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms