Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
GdnfP48540 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Gm14644-201ENSMUST00000116671 647 ntBASIC10.08□□□□□ -0.8
GdnfP48540 Gm12015-201ENSMUST00000117065 843 ntBASIC10.08□□□□□ -0.8
GdnfP48540 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Gm45224-201ENSMUST00000208203 414 ntBASIC10.08□□□□□ -0.8
GdnfP48540 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.08□□□□□ -0.8
GdnfP48540 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
GdnfP48540 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
GdnfP48540 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
GdnfP48540 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
GdnfP48540 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Gm7722-201ENSMUST00000120646 741 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Gm6963-201ENSMUST00000147879 379 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 AA914427-201ENSMUST00000193194 1166 ntBASIC10.07□□□□□ -0.8
GdnfP48540 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.07□□□□□ -0.8
GdnfP48540 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Gm18165-201ENSMUST00000217426 928 ntBASIC10.07□□□□□ -0.8
GdnfP48540 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.07□□□□□ -0.8
GdnfP48540 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
GdnfP48540 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.07□□□□□ -0.8
GdnfP48540 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
GdnfP48540 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
GdnfP48540 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms